AME

Aquatic Microbial Ecology

AME is a hybrid research journal on all aspects of aquatic microbial dynamics, in particular viruses, prokaryotes and eukaryotes (planktonic and benthic, autotrophic and heterotrophic) in marine, freshwater and brackish habitats.

Online: ISSN 1616-1564

Print: ISSN 0948-3055

DOI: https://doi.org/10.3354/ame

Impact Factor1.1 (JCR 2025 release)

Article Acceptance Rate20% (2024)

Average Time in Review255 days (2024)

Total Annual Downloads267.142 (2025)

Volume contents
Aquat Microb Ecol 61:291-305 (2010)

Effect of ocean acidification on microbial diversity and on microbe-driven biogeochemistry and ecosystem functioning

ABSTRACT: The ocean absorbs about 25% of anthropogenic CO2 emissions, which alters its chemistry. Among the changes of the carbonate system are an increase in the partial pressure of CO2 (pCO2) and a decline of pH; hence, the whole process is often referred to as 'ocean acidification'. Many microbial processes can be affected either directly or indirectly via a cascade of effects through the response of non-microbial groups and/or through changes in seawater chemistry. We briefly review the current understanding of the impact of ocean acidification on microbial diversity and processes, and highlight the gaps that need to be addressed in future research. The focus is on Bacteria, Archaea, viruses and protistan grazers but also includes total primary production of phytoplankton as well as species composition of eukaryotic phytoplankton. Some species and communities exhibit increased primary production at elevated pCO2. In contrast to their heterocystous counterparts, nitrogen fixation by non-heterocystous cyanobacteria is stimulated by elevated pCO2. The experimental data on the response of prokaryotic production to ocean acidification are not consistent. Very few other microbial processes have been investigated at environmentally relevant pH levels. The potential for microbes to adapt to ocean acidification, at either the species level by genetic change or at the community level through the replacement of sensitive species or groups by non- or less sensitive ones, is completely unknown. Consequently, the impact of ocean acidification on keystone species and microbial diversity needs to be elucidated. Most experiments used a short-term perturbation approach by using cultured organisms; few were conducted in mesocosms and none in situ. There is likely a lot to be learned from observations in areas naturally enriched with CO2, such as vents, upwelling and near-shore areas.

KEYWORDS

Jinwen Liu (Co-author)

  • INSU-CNRS, Laboratoire d'Océanographie de Villefranche, BP 28, 06234 Villefranche-sur-mer Cedex, France
  • Université Pierre et Marie Curie, Observatoire Océanologique de Villefranche, 06230 Villefranche-sur-mer, France
  • State Key Laboratory of Marine Environmental Science, Xiamen University, 361005 Xiamen, China

Markus G. Weinbauer (Co-author)

  • INSU-CNRS, Laboratoire d'Océanographie de Villefranche, BP 28, 06234 Villefranche-sur-mer Cedex, France
  • Université Pierre et Marie Curie, Observatoire Océanologique de Villefranche, 06230 Villefranche-sur-mer, France

Cornelia Maier (Co-author)

  • INSU-CNRS, Laboratoire d'Océanographie de Villefranche, BP 28, 06234 Villefranche-sur-mer Cedex, France
  • Université Pierre et Marie Curie, Observatoire Océanologique de Villefranche, 06230 Villefranche-sur-mer, France

Minhan Dai (Co-author)

  • State Key Laboratory of Marine Environmental Science, Xiamen University, 361005 Xiamen, China

Jean-Pierre Gattuso (Corresponding Author)

  • INSU-CNRS, Laboratoire d'Océanographie de Villefranche, BP 28, 06234 Villefranche-sur-mer Cedex, France
  • Université Pierre et Marie Curie, Observatoire Océanologique de Villefranche, 06230 Villefranche-sur-mer, France
gattuso@obs-vlfr.fr