DAO

Diseases of Aquatic Organisms

DAO is a hybrid research journal on all aspects of disease phenomena in aquatic organisms.

Online: ISSN 1616-1580

Print: ISSN 0177-5103

DOI: https://doi.org/10.3354/dao

Impact Factor1.2 (JCR 2025 release)

Article Acceptance Rate47.2% (2024)

Average Time in Review183 days (2024)

Total Annual Downloads579.998 (2025)

Volume contents
Dis Aquat Org 157:45-59 (2024)

Acipenserid herpesvirus 2 genome and partial validation of a qPCR for its detection in white sturgeon Acipenser transmontanus

ABSTRACT: White sturgeon Acipenser transmontanus is the primary species used for caviar and sturgeon meat production in the USA. An important pathogen of white sturgeon is acipenserid herpesvirus 2 (AciHV-2). In this study, 4 archived isolates from temporally discrete natural outbreaks spanning the past 30 yr were sequenced via Illumina and Oxford Nanopore Technologies platforms. Assemblies of approximately 134 kb were obtained for each isolate, and the putative ATPase subunit of the terminase gene was selected as a potential quantitative PCR (qPCR) target based on sequence conservation among AciHV-2 isolates and low sequence homology with other important viral pathogens. The qPCR was repeatable and reproducible, with a linear dynamic range covering 5 orders of magnitude, an efficiency of approximately 96%, an R2 of 0.9872, and an analytical sensitivity of 103 copies per reaction after 35 cycles. There was no cross-reaction with other known viruses or closely related sturgeon species, and no inhibition by sturgeon DNA. Clinical accuracy was assessed from white sturgeon juveniles exposed to AciHV-2 by immersion. Viral culture (gold standard) and qPCR were in complete agreement for both cell culture negative and cell culture positive samples, indicating that this assay has 100% relative accuracy compared to cell culture during an active outbreak. The availability of a whole-genome sequence for AciHV-2 and a highly specific and sensitive qPCR assay for detection of AciHV-2 in white sturgeon lays a foundation for further studies on host-pathogen interactions while providing a specific and rapid test for AciHV-2 in captive and wild populations.

KEYWORDS

Eva Marie Quijano Cardé (Co-author)

  • University of California-Davis, Davis, California 95616, USA

Kelsey Anenson (Co-author)

  • University of California-Davis, Davis, California 95616, USA

Geoffrey Waldbieser (Co-author)

  • United States Department of Agriculture - Agricultural Research Service, Stoneville, Mississippi 38776, USA

C. Titus Brown (Co-author)

  • University of California-Davis, Davis, California 95616, USA

Matt Griffin (Co-author)

  • Mississippi State University, Stoneville, Mississippi 38776, USA

Eileen Henderson (Co-author)

  • University of California-Davis, Davis, California 95616, USA

Susan Yun (Co-author)

  • University of California-Davis, Davis, California 95616, USA

Esteban Soto (Corresponding Author)

  • University of California-Davis, Davis, California 95616, USA
sotomartinez@ucdavis.edu