DOI: https://doi.org/10.3354/dao069175
copiedMolecular fingerprinting of Vibrio tapetis strains using three PCR-based methods: ERIC-PCR, REP-PCR and RAPD
ABSTRACT: Brown Ring Disease (BRD) is a bacterial disease caused by Vibrio tapetis which affects cultured clams and causes heavy economic losses. In this study, 28 V. tapetis strains isolated from 5 different hosts were intraspecifically characterized by 3 different polymerase chain reaction- (PCR-) based typing methods: enterobacteria repetitive intergenic consensus (ERIC)-PCR, repetitive extragenic palindromic (REP)-PCR and randomly amplified polymorphic DNA (RAPD)-PCR. Cluster analysis of genetic profiles obtained from these molecular techniques clearly showed the existence of 3 genetic groups strongly correlated to the host origin. The first group was formed by 23 V. tapetis strains isolated from Manila clam Ruditapes philippinarum, 1isolated from venus clam Venerupis aurea, and 1 isolated from common cockle Cerastoderma edule, all collected from France and Spain. The second group was formed by 2 strains isolated from carpet-shell clam R. decussatus cultured in the northwest of Spain. The third group was composed of 1strain isolated from Atlantic halibut Hippoglossus hippoglossus from the UK. We concluded that the 3 typing methods based on PCR were useful for the intraspecific typing of V. tapetis strains, and that they can potentially be used as a fast and reliable tool for epidemiological studies in the future.
KEYWORDS
José M. Rodríguez (Co-author)
- Departamento de Microbiología y Parasitología, Facultad de Biología, Universidad de Santiago de Compostela, Campus Sur s/n., 15782 Santiago de Compostela, Spain
Sonia López-Romalde (Co-author)
- Departamento de Microbiología y Parasitología, Facultad de Biología, Universidad de Santiago de Compostela, Campus Sur s/n., 15782 Santiago de Compostela, Spain
- Departamento de Microbiología, Facultad de Ciencias, Universidad de Málaga, Campus de Teatinos, 29071 Málaga, Spain
Roxana Beaz (Co-author)
- Departamento de Microbiología y Parasitología, Facultad de Biología, Universidad de Santiago de Compostela, Campus Sur s/n., 15782 Santiago de Compostela, Spain
M. Carmen Alonso (Co-author)
- Departamento de Microbiología, Facultad de Ciencias, Universidad de Málaga, Campus de Teatinos, 29071 Málaga, Spain
Dolores Castro (Co-author)
- Departamento de Microbiología, Facultad de Ciencias, Universidad de Málaga, Campus de Teatinos, 29071 Málaga, Spain
Jesús L. Romalde (Corresponding Author)
- Departamento de Microbiología y Parasitología, Facultad de Biología, Universidad de Santiago de Compostela, Campus Sur s/n., 15782 Santiago de Compostela, Spain
