MEPS

Marine Ecology Progress Series

MEPS is a leading hybrid research journal on all aspects of marine, coastal and estuarine ecology. Priority is given to outstanding research that advances our ecological understanding.

Online: ISSN 1616-1599

Print: ISSN 0171-8630

DOI: https://doi.org/10.3354/meps

Impact Factor2.1 (JCR 2025 release)

Article Acceptance Rate52.2% (2024)

Average Time in Review216 days (2024)

Total Annual Downloads2.917.087 (2025)

Volume contents
Mar Ecol Prog Ser 453:95-106 (2012)

Occupancy estimation of marine species: dealing with imperfect detectability

ABSTRACT: Underwater visual surveys are frequently used in monitoring programmes of marine populations. Species occupancy, defined as the probability of presence in a sampling unit, is a commonly used state variable. Imperfect detectability is a serious issue in such studies and, if ignored, may lead to incorrect inferences and erroneous management decisions. In this paper, we propose a methodology and field protocol for underwater visual surveys implemented by multiple observers. This approach can be applied for an unbiased occupancy estimation of marine species by explicitly incorporating imperfect detection into the modelling process. Based on a case study carried out in a Greek coastal area (Saronikos Gulf), the benefits of the proposed approach were demonstrated. Using a sufficient number of observers, the probability of recording false absences (i.e. the probability that the target species was present in a site but not detected) was minimized and occupancy estimation was greatly improved. For the whelk Stramonita haemastoma in the case study area, single-observer occupancy estimates were negatively biased and varied significantly (between 0.64 and 0.89) depending on the observer, while with the proposed methodology, using 5 observers, the obtained occupancy estimate had the value of 0.93. The probability of false absence was high in the single-observer case (between 0.10 and 0.30), and rather low with any combination of 3 observers (<0.025), while it dropped to practically 0 with 5 observers. As demonstrated in the case of the alien green alga Codium fragilefragile, occupancy models provide a flexible framework for relating occupancy to spatial and environmental covariates, testing ecological hypotheses and producing predictive distributional maps. Overall, the presented methodology and its potential extensions could prove extremely useful in a variety of applications in the marine environment.

KEYWORDS

Yiannis Issaris (Co-author)

  • Institute of Marine Biological Resources, Hellenic Centre for Marine Research, Anavyssos 19013, Greece
  • Department of Zoology−Marine Biology, School of Biology, University of Athens, Athens 15784, Greece

Stelios Katsanevakis (Co-author)

  • Institute of Marine Biological Resources, Hellenic Centre for Marine Research, Anavyssos 19013, Greece

Maria Salomidi (Co-author)

  • Institute of Oceanography, Hellenic Centre for Marine Research, Anavyssos 19013, Greece

Kostas Tsiamis (Co-author)

  • Institute of Oceanography, Hellenic Centre for Marine Research, Anavyssos 19013, Greece

Nikos Katsiaras (Co-author)

  • Institute of Oceanography, Hellenic Centre for Marine Research, Anavyssos 19013, Greece

George Verriopoulos (Co-author)