MEPS

Marine Ecology Progress Series

MEPS is a leading hybrid research journal on all aspects of marine, coastal and estuarine ecology. Priority is given to outstanding research that advances our ecological understanding.

Online: ISSN 1616-1599

Print: ISSN 0171-8630

DOI: https://doi.org/10.3354/meps

Impact Factor2.1 (JCR 2025 release)

Article Acceptance Rate52.2% (2024)

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Volume contents
Mar Ecol Prog Ser 644:1-13 (2020)

A multi-spectral fluorescence induction and relaxation (FIRe) technique for physiological and taxonomic analysis of phytoplankton communities

ABSTRACT:

Phytoplankton are extraordinarily diverse, comprising 13 phylogenetic groups, with diatoms, dinoflagellates, and haptophytes among the most prominent eukaryotes in the ocean. Development of sensor technologies for rapid taxonomic and physiological analysis of phytoplankton communities is crucial for ecological monitoring programs in the global ocean. We describe a novel, ultra-sensitive, multi-spectral fluorescence induction and relaxation instrument (a mini-FIRe) and examine its analytical capability of rapidly determining phytoplankton taxonomic groups, as well as physiological characteristics and photosynthetic rates. We collected and analyzed the database of spectral and photosynthetic properties of major taxonomic groups of phytoplankton. We revealed that the spectral shape of the functional absorption cross-section of Photosystem II (PSII), sPSII(lex), is remarkably constrained within each major phylogenetic group of eukaryotic phytoplankton, including diatoms, haptophytes, dinoflagellates, and chlorophytes. Variability in sPSII(lex) within each group was significantly smaller than the difference between groups. We also examined the classical excitation spectra of chl a fluorescence yields, Fm(lex). Our comparative analysis revealed that sPSII(lex) is a better and more specific proxy for taxonomic analysis. For instance, our developed sPSII-based algorithm correctly identified 90% of experimental data, compared to 77% identified by the Fm-based algorithm. Our results suggest that the multi-color variable fluorescence analysis offers a tool for combined physiological and taxonomic analysis, including identification of major phyla within the ‘red’ lineage of eukaryotic phytoplankton.

KEYWORDS

Diagram of sigma PS2, which is a product of the size of photosystem two antennae and quantum yield of photochemistry in PS2, plotted against wavelength for diatoms, dinoflagellates, haplophytes and green algae. Sigma PS2 decreases with increasing wavelength for all phytoplankton. The diagram is set against a microscope image of red flourescent phytoplankton cells on a black background.

Phytoplankton cells emit red fluorescence from chlorophyll with the fluorescence quantum yield reflecting physiological status and the spectral properties (graph of σPSII, r.u. against wavelength, nm ) reflecting taxonomic identity. Photo: M. Gorbunov

Unlike terrestrial plants, phytoplankton are extraordinarily diverse, comprising thirteen phylogenetic groups, with diatoms, dinoflagellates, and haptophytes being among the most prominent eukaryotes in the modern ocean. Development of sensor technologies for rapid taxonomic and physiological analysis of phytoplankton communities is crucial for ecological monitoring programs in the global ocean. A novel, ultra-sensitive, multi-spectral Fluorescence Induction and Relaxation technique offers analytical capabilities for rapid determination of phytoplankton taxonomic groups, together with physiological characteristics and photosynthetic rates in the ocean.

Maxim Y. Gorbunov (Corresponding Author)

  • Environmental Biology and Molecular Ecology Program, Department of Marine and Coastal Sciences, Rutgers, the State University of New Jersey, New Brunswick, New Jersey 08901, USA
gorbunov@marine.rutgers.edu

Evgeny Shirsin (Co-author)

  • Physics Department, MV Lomonosov Moscow State University, Moscow, 119991, Russia

Elena Nikonova (Co-author)

  • Physics Department, MV Lomonosov Moscow State University, Moscow, 119991, Russia

Victor V. Fadeev (Co-author)

  • Physics Department, MV Lomonosov Moscow State University, Moscow, 119991, Russia

Paul G. Falkowski (Co-author)

  • Environmental Biology and Molecular Ecology Program, Department of Marine and Coastal Sciences, Rutgers, the State University of New Jersey, New Brunswick, New Jersey 08901, USA
  • Department of Earth and Planetary Sciences, Rutgers, the State University of New Jersey, Piscataway, New Jersey 08854, USA