MEPS

Marine Ecology Progress Series

MEPS is a leading hybrid research journal on all aspects of marine, coastal and estuarine ecology. Priority is given to outstanding research that advances our ecological understanding.

Online: ISSN 1616-1599

Print: ISSN 0171-8630

DOI: https://doi.org/10.3354/meps

Impact Factor2.1 (JCR 2025 release)

Article Acceptance Rate52.2% (2024)

Average Time in Review216 days (2024)

Total Annual Downloads2.980.956 (2025)

Volume contents
Mar Ecol Prog Ser 736:107-127 (2024)

Intrinsic and extrinsic factors associated with the spatio-temporal distribution of infectious agents in early marine Chinook and coho salmon

ABSTRACT: Understanding the factors driving the spatial distribution of infectious agents in populations is key to predicting infectious agent distributions under future ecological and anthropogenic scenarios. We applied a geostatistical analysis to a data set of 59 infectious agents assayed in thousands of Chinook and coho salmon in their first marine year to identify intrinsic and extrinsic factors associated with the probability and density (infectious agent load) of infection. Meta-analysis of the pathogen-specific geostatistical models indicated that sea surface salinity was the extrinsic factor most frequently associated with infection probability and density for a majority of infectious agents. In addition, agents that were categorized as having a moderate risk of transmission from aquaculture to wild salmon were more likely to occur, and at higher infection densities, in fish collected closer to active aquaculture facilities. Although hypotheses pertaining to other intrinsic and extrinsic factors, including age at ocean entry, known hatchery origin, and sea surface temperature deviation, were not supported by the meta-analysis results, some individual agents demonstrated strong associations with these factors. Our results suggest that climate-change-driven shifts in coastal seawater salinity (and to a lesser extent, temperature) may result in changes to the infection dynamics of several infectious agents. In addition, our results contribute to existing evidence characterizing the risk of infectious agent transmission from netpen aquaculture to free-ranging salmon.

KEYWORDS

Arthur L. Bass (Corresponding Author)

  • University of British Columbia, Forest and Conservation Sciences, Vancouver, BC V6T 1Z4, Canada
  • Fisheries and Oceans Canada, Pacific Biological Station, Nanaimo, BC V9T 6N7, Canada
arthur.bass@dfo-mpo.gc.ca

Sean C. Anderson (Co-author)

  • Fisheries and Oceans Canada, Pacific Biological Station, Nanaimo, BC V9T 6N7, Canada

Andrew W. Bateman (Co-author)

  • Pacific Salmon Foundation, Vancouver, BC V6J 4S6, Canada

Brendan M. Connors (Co-author)

  • Institute of Ocean Sciences, Fisheries and Oceans Canada, Sidney, BC V8L 4B2, Canada

M. A. Pena (Co-author)

  • Institute of Ocean Sciences, Fisheries and Oceans Canada, Sidney, BC V8L 4B2, Canada

Shaorong Li (Co-author)

  • Fisheries and Oceans Canada, Pacific Biological Station, Nanaimo, BC V9T 6N7, Canada

Karia H. Kaukinen (Co-author)

  • Fisheries and Oceans Canada, Pacific Biological Station, Nanaimo, BC V9T 6N7, Canada

David A. Patterson (Co-author)

  • Fisheries and Oceans Canada, Cooperative Resource Management Institute School of Resource and Environmental Management, Simon Fraser University, Science Branch, Burnaby, BC V5A 1S6, Canada

Scott G. Hinch (Co-author)

  • University of British Columbia, Forest and Conservation Sciences, Vancouver, BC V6T 1Z4, Canada

Kristina M. Miller (Co-author)

  • University of British Columbia, Forest and Conservation Sciences, Vancouver, BC V6T 1Z4, Canada
  • Fisheries and Oceans Canada, Pacific Biological Station, Nanaimo, BC V9T 6N7, Canada